Translates ENSEMBL IDs to add on human-readable gene SYMBOLs and other relevant identifiers to a data frame output from DESeq2.

TranslateENSEMBL(df, dbi, id = NULL)

Arguments

df

data.frame output from DESeq2 of counts or statistical analyses (logFoldChange), with rownames as the ENSEMBL identifiers

dbi

AnnotationDBI organism database, such as org.Mm.eg.db

id

Column name or index with ENSEMBL identifiers

Value

data.frame with new annotation columns corresponding gene SYMBOL from an AnnotationDBI database

Examples

TranslateEnsembl(results(dds), org.Mm.eg.db)